BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028H11LP1|AL428987
(864 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig751 1696 0.0
>3x_Contig751
Length = 2335
Score = 1696 bits (855), Expect = 0.0
Identities = 855/855 (100%)
Strand = Plus / Minus
Query: 10 tccaacatattgcattcgagcaataatcgaagagcaatatccaaatcgaataagcttgag 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1860 tccaacatattgcattcgagcaataatcgaagagcaatatccaaatcgaataagcttgag 1801
Query: 70 tcagaatagaagaaagaatcatcgttcattgaccaatttccaaattcttcagggttctca 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1800 tcagaatagaagaaagaatcatcgttcattgaccaatttccaaattcttcagggttctca 1741
Query: 130 ttaaagacaccatccctcttaaaatgcgaaagaaacgaccccaatccttctatgtcatgc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1740 ttaaagacaccatccctcttaaaatgcgaaagaaacgaccccaatccttctatgtcatgc 1681
Query: 190 aatttaattaaaagagtgagcaataaggtaatatgatcaacttttgccttcccatcttta 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1680 aatttaattaaaagagtgagcaataaggtaatatgatcaacttttgccttcccatcttta 1621
Query: 250 actagtttccagaggaaatccttaagatttattgaatcctctgaattcgttttgtgctcg 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1620 actagtttccagaggaaatccttaagatttattgaatcctctgaattcgttttgtgctcg 1561
Query: 310 acgccaaattttgatattatttctgttggatcacaaacttcaatgcatcccatatactgt 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1560 acgccaaattttgatattatttctgttggatcacaaacttcaatgcatcccatatactgt 1501
Query: 370 tcaattgcttcccttttggaaccctttttgaaaagatagtcaccgtatgactttttaatc 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 tcaattgcttcccttttggaaccctttttgaaaagatagtcaccgtatgactttttaatc 1441
Query: 430 tcttgaactttcacgtctggaagagaatgctgtttggcaagttctaatgctactgaatac 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 tcttgaactttcacgtctggaagagaatgctgtttggcaagttctaatgctactgaatac 1381
Query: 490 atgtccttttgacatatggtgttcaattgatcgtctaacttcttttgccttaatttgtga 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 atgtccttttgacatatggtgttcaattgatcgtctaacttcttttgccttaatttgtga 1321
Query: 550 atcacaccgttagaagttaaaaggttgacacttgccccatcactaaagatatcaatcaca 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 atcacaccgttagaagttaaaaggttgacacttgccccatcactaaagatatcaatcaca 1261
Query: 610 gagctggtgataagtaagctgtaagagattatcttggtcttaatatctaggatgactgcc 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 gagctggtgataagtaagctgtaagagattatcttggtcttaatatctaggatgactgcc 1201
Query: 670 cgaatggtctcatttggggtcttacccaaatgcaaagaggaagtcgtaatatttgacaca 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 cgaatggtctcatttggggtcttacccaaatgcaaagaggaagtcgtaatatttgacaca 1141
Query: 730 agtactaggatatgatctgcggatattggaaagatacgttttgctgtggggatatcaaca 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 agtactaggatatgatctgcggatattggaaagatacgttttgctgtggggatatcaaca 1081
Query: 790 attaacgatcgtttacttccagagcccatgtaaatatctagcttgtcctttagtgcacaa 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 attaacgatcgtttacttccagagcccatgtaaatatctagcttgtcctttagtgcacaa 1021
Query: 850 ataaactcatccgtc 864
|||||||||||||||
Sbjct: 1020 ataaactcatccgtc 1006
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6931
Number of Sequences: 1807
Number of extensions: 6931
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 864
length of database: 10,358,551
effective HSP length: 16
effective length of query: 848
effective length of database: 10,329,639
effective search space: 8759533872
effective search space used: 8759533872
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)